DatasetT11b high vs low squamous_GSEA_Ranked
PhenotypeNoPhenotypeAvailable
Upregulated in classna_neg
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)-0.15707582
Normalized Enrichment Score (NES)-0.7454116
Nominal p-value0.81569964
FDR q-value0.81650054
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Map3k206360.723-0.1343Yes
2Hif1a6840.683-0.1243Yes
3Ccna26940.673-0.1053Yes
4Mcm36970.670-0.0847Yes
5Cdk17240.651-0.0706Yes
6Cks28120.588-0.0735Yes
7Mad2l18500.566-0.0648Yes
8Cenpa8920.542-0.0578Yes
9Uck21166-0.533-0.1084Yes
10Tent4a1213-0.542-0.1027Yes
11Orc51240-0.546-0.0919Yes
12Smarcc11250-0.548-0.0768Yes
13Odf21431-0.581-0.1029Yes
14Smad31449-0.584-0.0887Yes
15Odc11542-0.601-0.0924Yes
16Numa11560-0.605-0.0776Yes
17Srsf11572-0.606-0.0611Yes
18Mtf21576-0.607-0.0427Yes
19Ilf31590-0.609-0.0267Yes
20Cul11732-0.635-0.0415Yes
21Bub31742-0.637-0.0236Yes
22Ythdc11786-0.646-0.0139Yes
23Lig31871-0.667-0.0136Yes
24Arid4a1879-0.6690.0058Yes
25Prpf4b1961-0.6860.0074Yes
26Pura2032-0.6980.0122Yes
27Nsd22154-0.7300.0053Yes
28Slc38a12233-0.7470.0096Yes
29Nek22485-0.816-0.0266Yes
30Pds5b2511-0.822-0.0069Yes
31Tle32595-0.846-0.0007Yes
32Mnat12739-0.887-0.0080Yes
33Prmt52797-0.9050.0064Yes
34Cul52799-0.9050.0347Yes
35Cdc25a2998-0.9750.0166Yes
36Kif5b3281-1.107-0.0182Yes
37Ccnd13303-1.1120.0117Yes
38Fancc3326-1.1270.0419Yes
39Efna53407-1.1630.0588Yes
40Xpo13499-1.2100.0745Yes
41Slc12a24021-2.2500.0168Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT